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RNAseq (VIPER)
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Service Description
Sample Requirements:
RNA Quality:
DV200 > 40%
DNase Treated purified RNA
MBCF optimal input :
250pg-10ng (>1ng recommended)
Volume:
>10ul
Analytical Goals:
Gene expression profiling, differential expression testing between conditions (replicates required!), pathway, gene ontology and gene set enrichment analysis
suitable for degraded RNA (e.g FFPE) and non-polyA non-coding RNAs
Other Information:
Strand specific
Receive 50M 150bp read pairs per sample
User Manual:
SMARTer Stranded Total RNAseq Kit v3 - Pico Input Mammalian
Recommended Bioinformatics Pipeline:
Viper (Visualization Pipeline for RNAseq)
HOME
ABOUT US
SERVICES
RNA Services
>
mRNAseq
TotalRNAseq
Low Input mRNAseq
Low Input TotalRNAseq
Targeted RNAseq
small RNAseq
DNA Services
>
Whole Genome Sequencing
Whole Exome Sequencing
Methylation Profiling
ChIPseq/Cut & Run
ATACseq
Single Cell Sequencing Services
Bioinformatics Services
>
RNAseq (VIPER)
Peak Calling
Copy Number Analysis
Variant Calling
Instrumentation
SAMPLE SUBMISSION
DATA TRANSFER
PRICING
FAQ